Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 Z75741.1-201ENST00000446793 314 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 CCDC75P1-201ENST00000469247 791 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AL352979.3-201ENST00000553515 247 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC015914.2-201ENST00000618167 288 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 RNA5SP374-201ENST00000362939 125 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 Z93242.1-201ENST00000427102 353 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 MIR5680-201ENST00000577577 84 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 MFSD8-242ENST00000641690 4199 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC005189.1-201ENST00000431286 310 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 FCF1P7-201ENST00000451185 558 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 SNORD105B-201ENST00000458770 79 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AP001992.1-205ENST00000462248 379 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC025181.1-201ENST00000477507 416 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 RPL29P14-201ENST00000495837 428 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AC009303.3-201ENST00000591103 736 ntBASIC3.68□□□□□ -1.82
CHD8Q9HCK8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHD8Q9HCK8 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 SNORA70.6-201ENST00000383934 134 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 HMGB3P19-201ENST00000403971 560 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC096644.3-201ENST00000416788 338 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 VN1R32P-201ENST00000452234 905 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RPL23AP97-201ENST00000568955 471 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC114878.2-201ENST00000604863 1251 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 Y_RNA.269-201ENST00000364685 89 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 MIR489-201ENST00000384923 84 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AL513477.1-202ENST00000417061 214 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC138761.5-201ENST00000433967 325 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RNA5SP303-201ENST00000516192 130 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AL160290.3-201ENST00000604869 165 ntBASIC3.67□□□□□ -1.82
CHD8Q9HCK8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHD8Q9HCK8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms