Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL445928.1-201ENST00000435545 222 ntBASIC8.33□□□□□ -1.08
CD44P16070 OR52I1-201ENST00000450052 1050 ntBASIC8.33□□□□□ -1.08
CD44P16070 HMGB1P25-201ENST00000468402 607 ntBASIC8.33□□□□□ -1.08
CD44P16070 RPS26P24-201ENST00000497656 331 ntBASIC8.33□□□□□ -1.08
CD44P16070 NACAP6-201ENST00000509572 622 ntBASIC8.33□□□□□ -1.08
CD44P16070 IGKV2OR22-4-201ENST00000523309 367 ntBASIC8.33□□□□□ -1.08
CD44P16070 AP001157.1-201ENST00000550837 2339 ntBASIC8.33□□□□□ -1.08
CD44P16070 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC8.33□□□□□ -1.08
CD44P16070 AC009902.3-201ENST00000606235 2172 ntBASIC8.33□□□□□ -1.08
CD44P16070 AL359547.2-201ENST00000615810 418 ntBASIC8.33□□□□□ -1.08
CD44P16070 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC8.33□□□□□ -1.08
CD44P16070 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.33□□□□□ -1.08
CD44P16070 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.33□□□□□ -1.08
CD44P16070 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CD44P16070 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
CD44P16070 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 MTND5P32-201ENST00000560711 1802 ntBASIC8.32□□□□□ -1.08
CD44P16070 SNORA55-201ENST00000364587 135 ntBASIC8.32□□□□□ -1.08
CD44P16070 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 RNU6-1207P-201ENST00000384343 107 ntBASIC8.32□□□□□ -1.08
CD44P16070 AL136372.1-201ENST00000403060 228 ntBASIC8.32□□□□□ -1.08
CD44P16070 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC8.32□□□□□ -1.08
CD44P16070 RPL35AP22-201ENST00000436855 335 ntBASIC8.32□□□□□ -1.08
CD44P16070 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 AC007000.1-201ENST00000453064 794 ntBASIC8.32□□□□□ -1.08
CD44P16070 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 AC006967.1-201ENST00000467608 589 ntBASIC8.32□□□□□ -1.08
CD44P16070 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.32□□□□□ -1.08
CD44P16070 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 OR7H2P-201ENST00000513483 306 ntBASIC8.32□□□□□ -1.08
CD44P16070 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 RNU6-496P-201ENST00000516145 99 ntBASIC8.32□□□□□ -1.08
CD44P16070 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.32□□□□□ -1.08
CD44P16070 IGLVI-70-201ENST00000523272 390 ntBASIC8.32□□□□□ -1.08
CD44P16070 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 MIR4282-201ENST00000583613 67 ntBASIC8.32□□□□□ -1.08
CD44P16070 SNORD39.3-201ENST00000584451 71 ntBASIC8.32□□□□□ -1.08
CD44P16070 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 AC084757.4-201ENST00000616350 526 ntBASIC8.32□□□□□ -1.08
CD44P16070 AP003789.1-201ENST00000617737 605 ntBASIC8.32□□□□□ -1.08
CD44P16070 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC8.32□□□□□ -1.08
CD44P16070 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 GABPAP-201ENST00000419271 1356 ntBASIC8.32□□□□□ -1.08
CD44P16070 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
CD44P16070 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CD44P16070 AL359922.2-201ENST00000581788 3017 ntBASIC8.32□□□□□ -1.08
CD44P16070 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.32□□□□□ -1.08
CD44P16070 ZNF101P1-201ENST00000435701 1720 ntBASIC8.32□□□□□ -1.08
CD44P16070 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CD44P16070 SNORD113-8-201ENST00000363497 74 ntBASIC8.31□□□□□ -1.08
CD44P16070 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CD44P16070 RNU6-147P-201ENST00000383983 107 ntBASIC8.31□□□□□ -1.08
CD44P16070 RNU6-393P-201ENST00000384475 107 ntBASIC8.31□□□□□ -1.08
CD44P16070 RNU6-102P-201ENST00000384485 104 ntBASIC8.31□□□□□ -1.08
CD44P16070 RNA5SP105-201ENST00000391123 113 ntBASIC8.31□□□□□ -1.08
CD44P16070 RNU6-651P-201ENST00000411040 105 ntBASIC8.31□□□□□ -1.08
CD44P16070 AC127537.1-201ENST00000418183 748 ntBASIC8.31□□□□□ -1.08
CD44P16070 AC003071.2-201ENST00000423857 315 ntBASIC8.31□□□□□ -1.08
CD44P16070 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC8.31□□□□□ -1.08
CD44P16070 DDX11L10-201ENST00000430178 571 ntBASIC8.31□□□□□ -1.08
CD44P16070 HMGN2P24-201ENST00000433516 273 ntBASIC8.31□□□□□ -1.08
CD44P16070 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CD44P16070 AC108734.1-201ENST00000439549 399 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms