Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 AP000473.2-201ENST00000602659 1537 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 SNORA73.2-201ENST00000364946 201 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 RPL6P29-201ENST00000414863 865 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 RN7SL812P-201ENST00000493791 279 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 HSPE1P5-201ENST00000561489 272 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 AL671309.1-201ENST00000603750 544 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 MUC2-202ENST00000613187 4845 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 CASC19-204ENST00000641001 2055 ntBASIC8.11□□□□□ -1.11
SHROOM4Q9ULL8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AL512326.1-201ENST00000443050 721 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 PSMC1P13-201ENST00000458195 985 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 SYT14P1-201ENST00000481459 721 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AC092474.3-201ENST00000603022 568 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 SRGNP1-201ENST00000603392 451 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AC135178.6-201ENST00000605314 398 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AC019176.2-201ENST00000611579 315 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AL021997.2-201ENST00000615674 271 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 LINC00561-201ENST00000565815 2738 ntBASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHROOM4Q9ULL8 AC000374.1-201ENST00000434698 1745 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 SNORD96B-201ENST00000386148 79 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AL390879.2-203ENST00000426943 1121 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AL160175.1-201ENST00000428124 247 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 RPL17P35-201ENST00000432217 549 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 RPS27AP18-201ENST00000515536 459 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 RNA5SP73-201ENST00000516744 108 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 RNU6-1308P-201ENST00000516817 103 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 SULT1C2P2-201ENST00000562517 294 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AL049844.2-201ENST00000604280 628 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC091905.2-201ENST00000623143 306 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC126323.6-202ENST00000568092 3511 ntBASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHROOM4Q9ULL8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC8.09□□□□□ -1.12
SHROOM4Q9ULL8 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AP000907.1-201ENST00000428428 510 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 GOT2P5-201ENST00000433995 546 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC022431.1-201ENST00000450941 438 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 MTND2P30-201ENST00000456663 382 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 CAB39P1-201ENST00000502277 460 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC004923.2-201ENST00000529649 369 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 KATNBL1P5-201ENST00000605015 517 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC099669.2-201ENST00000616549 437 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 AC006213.5-201ENST00000619673 288 ntBASIC8.08□□□□□ -1.12
SHROOM4Q9ULL8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms