Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RNA5SP43-201ENST00000516559 110 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 OR5D15P-201ENST00000531671 942 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC010928.3-201ENST00000587712 541 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC096586.1-201ENST00000610267 561 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 MIR6768-201ENST00000610734 72 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RMST_10.1-201ENST00000616309 154 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL590396.2-201ENST00000636511 1041 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 BRAFP1-201ENST00000445336 2703 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL136164.3-201ENST00000624429 3978 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC008758.3-201ENST00000507003 1829 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MTND5P28-201ENST00000438005 1594 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 SAMMSON-226ENST00000642089 1582 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AL512422.1-201ENST00000407033 553 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 U3.35-201ENST00000408405 208 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RNU4-27P-201ENST00000410889 139 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AMD1P2-201ENST00000412936 992 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 PTP4A1P5-201ENST00000420305 455 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AL391219.1-201ENST00000422570 483 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RGS17P1-201ENST00000423358 553 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 CHEK2P5-201ENST00000423877 246 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 FAM204CP-201ENST00000424489 642 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC093422.3-201ENST00000428506 305 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC093414.1-201ENST00000434712 514 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AL451139.1-201ENST00000434718 346 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC004938.1-201ENST00000438468 308 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RHEBP2-201ENST00000450289 600 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MTND2P30-201ENST00000456663 382 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 COPS8P2-201ENST00000473228 627 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RN7SL97P-201ENST00000486780 299 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RNU6-202P-201ENST00000515998 96 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RNU6-709P-201ENST00000517257 104 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 SOD1P3-201ENST00000518682 454 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 OR4C2P-201ENST00000530855 1064 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MTCYBP28-201ENST00000566728 1132 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC012531.5-201ENST00000611375 151 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC006213.5-201ENST00000619673 288 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MIR4278-201ENST00000636094 69 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 AL163152.1-201ENST00000642001 374 ntBASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.09□□□□□ -1.91
MRPL55Q7Z7F7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
MRPL55Q7Z7F7 PABPC1P6-201ENST00000445594 1829 ntBASIC3.09□□□□□ -1.92
MRPL55Q7Z7F7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.09□□□□□ -1.92
MRPL55Q7Z7F7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms