Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 MTCO1P12-201ENST00000414273 1543 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 RNU6-525P-201ENST00000363685 104 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 RNA5SP146-201ENST00000410743 123 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 RPL21P23-201ENST00000446654 460 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AC084198.1-201ENST00000477747 402 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 RN7SKP13-201ENST00000515933 244 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 LSM1P2-201ENST00000604911 322 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 SNORA62.6-201ENST00000606322 83 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AL442067.2-201ENST00000614033 363 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AC243312.2-201ENST00000623340 601 ntBASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC141Q6ZP82 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 PRO1804-201ENST00000623780 2050 ntBASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 CAB39P1-201ENST00000502277 460 ntBASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 CYP4A43P-201ENST00000568156 121 ntBASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC141Q6ZP82 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 RNVU1-14-201ENST00000384770 164 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 RPS7P15-201ENST00000415804 584 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 AC091390.3-201ENST00000426478 338 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 HLA-N-201ENST00000437516 135 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 APOOP2-201ENST00000461561 539 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 AC007458.1-201ENST00000542812 373 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 GNRHR2P1-201ENST00000555315 631 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 MTND6P33-201ENST00000571794 183 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 AL354760.1-201ENST00000608357 643 ntBASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC141Q6ZP82 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 MIR490-201ENST00000384865 128 ntBASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC092641.1-201ENST00000440229 772 ntBASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC104978.1-201ENST00000449387 391 ntBASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 SETP14-201ENST00000497538 873 ntBASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 RANP9-201ENST00000519957 271 ntBASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC141Q6ZP82 AC083899.2-201ENST00000423285 1376 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 MTND5P1-201ENST00000445440 1375 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 REREP1Y-201ENST00000422655 198 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 REREP2Y-201ENST00000439103 200 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 AC017037.1-201ENST00000508460 471 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 OR7E13P-201ENST00000526052 910 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 DEFB109D-201ENST00000529497 240 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 OR5B10P-201ENST00000532869 642 ntBASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC141Q6ZP82 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms