Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNA5SP170-201ENST00000517150 101 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AP005597.2-201ENST00000526238 341 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC130360.2-201ENST00000533477 1556 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VARS2Q5ST30 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 MIR3146-201ENST00000580367 79 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AL355974.1-201ENST00000618896 1708 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC103705.1-201ENST00000619013 241 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 AL159153.1-201ENST00000619688 317 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.65□□□□□ -1.18
VARS2Q5ST30 AC130304.1-201ENST00000622942 2385 ntBASIC7.65□□□□□ -1.18
VARS2Q5ST30 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
VARS2Q5ST30 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
VARS2Q5ST30 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.19
VARS2Q5ST30 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC084782.1-201ENST00000564401 2465 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL161912.4-201ENST00000623889 2468 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 PRO1804-201ENST00000623780 2050 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 RBPJP2-201ENST00000618187 1444 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL023806.3-201ENST00000638502 2704 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 Y_RNA.48-201ENST00000362710 103 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 RNU4-42P-201ENST00000364738 142 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 RN7SKP55-201ENST00000364888 307 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 Y_RNA.597-201ENST00000410463 100 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 RN7SKP268-201ENST00000411107 316 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC068533.1-201ENST00000418542 415 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC004866.2-201ENST00000438285 481 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 RPL12P49-201ENST00000441100 121 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 GAPDHP53-201ENST00000458397 924 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC111193.1-201ENST00000504097 155 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 HMGN1P28-201ENST00000521340 364 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC091516.1-201ENST00000549191 703 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 LSM3P2-201ENST00000551246 273 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL135978.1-201ENST00000553618 1266 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC073410.2-201ENST00000603240 332 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 CR382285.1-202ENST00000604687 547 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 AL109809.4-201ENST00000603520 2185 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.64□□□□□ -1.19
VARS2Q5ST30 OR52K3P-202ENST00000641797 1729 ntBASIC7.64□□□□□ -1.19
VARS2Q5ST30 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VARS2Q5ST30 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
VARS2Q5ST30 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
VARS2Q5ST30 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.63□□□□□ -1.19
VARS2Q5ST30 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VARS2Q5ST30 AL449283.1-201ENST00000602631 3403 ntBASIC7.63□□□□□ -1.19
VARS2Q5ST30 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms