Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 YPEL5P2-201ENST00000605553 359 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A5P29400 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A5P29400 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A5P29400 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A5P29400 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A5P29400 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A5P29400 AC126323.6-202ENST00000568092 3511 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A5P29400 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A5P29400 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A5P29400 RNU4-35P-201ENST00000362588 141 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL4A5P29400 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.51□□□□□ -1.69
COL4A5P29400 RANP9-201ENST00000519957 271 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A5P29400 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A5P29400 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A5P29400 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A5P29400 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A5P29400 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A5P29400 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A5P29400 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A5P29400 AC003985.2-201ENST00000562268 1669 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL4A5P29400 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC058791.1-201ENST00000608412 3198 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A5P29400 RNA5SP50-201ENST00000363731 107 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 RNU6-1279P-201ENST00000383917 103 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AL359643.1-201ENST00000404109 423 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 SEPT7P8-201ENST00000413308 775 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC010740.1-201ENST00000417035 684 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A5P29400 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A5P29400 AL645931.1-201ENST00000439737 410 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 SETD6P1-201ENST00000444575 317 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC017015.1-201ENST00000477387 286 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 RPL31P61-201ENST00000496160 376 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A5P29400 AC010342.1-201ENST00000514047 877 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 RNA5SP164-201ENST00000516533 110 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 IGKV2-38-201ENST00000517443 247 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A5P29400 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A5P29400 AC068790.5-201ENST00000602741 355 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AL354760.1-201ENST00000608357 643 ntBASIC4.5□□□□□ -1.69
COL4A5P29400 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A5P29400 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A5P29400 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A5P29400 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A5P29400 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.49□□□□□ -1.69
COL4A5P29400 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 AC009229.4-201ENST00000623854 1947 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 GEMIN8P3-201ENST00000445417 720 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 RPL26P28-201ENST00000451325 435 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 AC090602.1-201ENST00000469695 252 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 AL136126.1-201ENST00000473603 402 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
COL4A5P29400 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.49□□□□□ -1.69
COL4A5P29400 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A5P29400 RN7SKP289-201ENST00000517244 295 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 HIGD1AP18-201ENST00000520730 278 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.49□□□□□ -1.69
COL4A5P29400 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.49□□□□□ -1.69
COL4A5P29400 AC133552.5-201ENST00000604266 540 ntBASIC4.49□□□□□ -1.69
COL4A5P29400 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL4A5P29400 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A5P29400 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 AC010266.2-201ENST00000564741 3255 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 NPM1P37-201ENST00000403105 874 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A5P29400 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.48□□□□□ -1.69
COL4A5P29400 SETP9-201ENST00000423837 832 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AL512649.1-201ENST00000428997 581 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC006994.1-201ENST00000438212 839 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A5P29400 AGGF1P3-201ENST00000493675 1213 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A5P29400 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.48□□□□□ -1.69
COL4A5P29400 AC115621.1-201ENST00000604653 858 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 SNORD91B-202ENST00000608459 222 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 MIR7112-201ENST00000616126 65 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 MIR6852-201ENST00000621699 66 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AL035425.3-201ENST00000564206 4996 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A5P29400 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A5P29400 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL4A5P29400 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.48□□□□□ -1.69
COL4A5P29400 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 AL356274.2-201ENST00000624379 3752 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AL121839.2-201ENST00000565058 6943 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms