Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 NAMA-204ENST00000604258 2133 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 EXOC7-221ENST00000634349 2124 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 NTN4-202ENST00000344911 3152 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC068870.3-201ENST00000625077 2536 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL117258.1-201ENST00000637218 2656 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ACSL1-204ENST00000504342 2333 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005304.2-201ENST00000580134 1982 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL23-201ENST00000245857 588 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 FOLR2-201ENST00000298223 1138 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-940P-201ENST00000363433 104 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-115P-201ENST00000364310 107 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR647-201ENST00000384823 96 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-747P-201ENST00000390928 104 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-241P-201ENST00000391148 104 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005005.1-201ENST00000397595 682 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 UBA52P6-201ENST00000399822 382 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL139039.1-201ENST00000401900 692 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-519P-201ENST00000410590 108 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RNU6-1001P-201ENST00000411265 100 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC092447.6-201ENST00000414578 210 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RPS5P3-201ENST00000414617 616 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC004986.1-201ENST00000414855 607 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL663061.1-201ENST00000416625 580 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL161742.1-201ENST00000418154 584 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL36AP36-201ENST00000418616 301 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 MTHFD2P3-201ENST00000423135 221 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 FDPSP6-201ENST00000425091 512 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL035411.1-201ENST00000427762 690 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 BX276092.6-201ENST00000430476 250 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 TARM1-201ENST00000432826 897 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 EIF5AP4-201ENST00000441206 465 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC012065.1-201ENST00000441870 686 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008267.4-201ENST00000442005 521 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC064862.4-201ENST00000442180 334 ntBASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-4Q9BYR3 PHBP13-201ENST00000453244 760 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms