Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 RPL12P25-202ENST00000598100 674 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AP000769.2-201ENST00000602344 396 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC105227.2-201ENST00000615075 605 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC067852.7-201ENST00000623270 535 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AP000676.3-201ENST00000623299 569 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AC020633.1-201ENST00000468439 2247 ntBASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.1□□□□□ -1.43
SMC1BQ8NDV3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC010928.1-201ENST00000592477 1447 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 RNU4-72P-201ENST00000410754 173 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 GPS2P1-201ENST00000411761 986 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC006960.1-201ENST00000419980 153 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 NRBF2P3-201ENST00000432731 865 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC005154.2-201ENST00000438110 379 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 CEACAMP6-201ENST00000452007 574 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC011979.1-201ENST00000472300 483 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC073522.1-201ENST00000483312 377 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 snoU109.5-201ENST00000516231 132 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 MIR2116-201ENST00000517221 80 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC087373.1-201ENST00000524920 491 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 MIR3912-201ENST00000577566 105 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 VN1R88P-201ENST00000596787 292 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC110760.3-201ENST00000598794 467 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC023043.4-201ENST00000612081 449 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 ZYXP1-201ENST00000617638 118 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AC103706.2-201ENST00000638080 240 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 AL034549.2-201ENST00000618285 3373 ntBASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMC1BQ8NDV3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 AC120338.1-201ENST00000625074 1541 ntBASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SMC1BQ8NDV3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 TCP11X1-202ENST00000622971 1372 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 TTC39DP-201ENST00000416781 1688 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC099654.2-201ENST00000433031 1980 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AL731566.1-201ENST00000620490 1937 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 SNORD116-1-201ENST00000384335 95 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 RNU6-77P-201ENST00000410554 91 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MTND4P22-201ENST00000413116 1169 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MTCO1P3-201ENST00000429327 192 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 TXNP5-201ENST00000441043 315 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms