Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CA15P1-201ENST00000481698 905 ntBASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 AC092667.1-201ENST00000434301 2586 ntBASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHAC2Q9Y5I4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 AC140113.3-201ENST00000605663 199 ntBASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 AP005212.1-201ENST00000581547 1997 ntBASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHAC2Q9Y5I4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 MIR4674-201ENST00000582457 87 ntBASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHAC2Q9Y5I4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHAC2Q9Y5I4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
PCDHAC2Q9Y5I4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AL162377.1-201ENST00000618844 1793 ntBASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 DUSP5P1-201ENST00000441325 1139 ntBASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 HOMER2P1-201ENST00000455653 964 ntBASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHAC2Q9Y5I4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 KRT126P-201ENST00000549467 1181 ntBASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 AC116407.4-201ENST00000623319 1061 ntBASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHAC2Q9Y5I4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHAC2Q9Y5I4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms