Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDHGC4Q9Y5F7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 KSR1P1-201ENST00000446298 240 ntBASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 CD177P1-201ENST00000606252 935 ntBASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 AP001412.1-201ENST00000608405 714 ntBASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
PCDHGC4Q9Y5F7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 AL445675.2-201ENST00000620291 557 ntBASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC4Q9Y5F7 ZNF815P-204ENST00000434898 1737 ntBASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC4Q9Y5F7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 KRT16P1-201ENST00000399124 1418 ntBASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 TSPY7P-201ENST00000431358 1114 ntBASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 SNORA78-201ENST00000459373 127 ntBASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 AC104417.2-201ENST00000562989 1793 ntBASIC19.55■□□□□ 0.72
PCDHGC4Q9Y5F7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 AC007952.6-201ENST00000573168 2673 ntBASIC19.54■□□□□ 0.72
PCDHGC4Q9Y5F7 AC003957.1-201ENST00000625108 2673 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms