Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
LHX6Q9UPM6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 AC112907.2-201ENST00000448639 330 ntBASIC18.32■□□□□ 0.52
LHX6Q9UPM6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 AC083849.1-201ENST00000615227 514 ntBASIC18.32■□□□□ 0.52
LHX6Q9UPM6 FBXW4P1-201ENST00000426721 2239 ntBASIC18.32■□□□□ 0.52
LHX6Q9UPM6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
LHX6Q9UPM6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AL160237.2-201ENST00000556165 472 ntBASIC18.31■□□□□ 0.52
LHX6Q9UPM6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 IFNL4P1-201ENST00000607083 540 ntBASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AP000692.2-201ENST00000608391 879 ntBASIC18.31■□□□□ 0.52
LHX6Q9UPM6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LHX6Q9UPM6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 FAM220CP-201ENST00000395253 831 ntBASIC18.3■□□□□ 0.52
LHX6Q9UPM6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 AC131212.4-201ENST00000623606 975 ntBASIC18.3■□□□□ 0.52
LHX6Q9UPM6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 KRT8P36-201ENST00000489121 1440 ntBASIC18.3■□□□□ 0.52
LHX6Q9UPM6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.3■□□□□ 0.52
LHX6Q9UPM6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.29■□□□□ 0.52
LHX6Q9UPM6 EMBP1-201ENST00000458200 901 ntBASIC18.29■□□□□ 0.52
LHX6Q9UPM6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 C1QL1P1-201ENST00000568105 661 ntBASIC18.29■□□□□ 0.52
LHX6Q9UPM6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 CFTRP2-201ENST00000634304 199 ntBASIC18.29■□□□□ 0.52
LHX6Q9UPM6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LHX6Q9UPM6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms