Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.6■□□□□ 0.89
SALL4Q9UJQ4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 MIPEPP3-201ENST00000412105 444 ntBASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SALL4Q9UJQ4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.58■□□□□ 0.89
SALL4Q9UJQ4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SALL4Q9UJQ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 AC104417.2-201ENST00000562989 1793 ntBASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 BX276092.2-201ENST00000417668 665 ntBASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 AC005829.2-201ENST00000571422 1056 ntBASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.57■□□□□ 0.88
SALL4Q9UJQ4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms