Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC079781.3-201ENST00000449110 356 ntBASIC20.61■□□□□ 0.89
CHD7Q9P2D1 KRT18P1-202ENST00000452408 1331 ntBASIC20.61■□□□□ 0.89
CHD7Q9P2D1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 TSPY12P-201ENST00000421279 868 ntBASIC20.61■□□□□ 0.89
CHD7Q9P2D1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD7Q9P2D1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.6■□□□□ 0.89
CHD7Q9P2D1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
CHD7Q9P2D1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 AC026310.3-201ENST00000625186 2373 ntBASIC20.59■□□□□ 0.89
CHD7Q9P2D1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD7Q9P2D1 AL391422.3-201ENST00000603791 2761 ntBASIC20.59■□□□□ 0.89
CHD7Q9P2D1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CHD7Q9P2D1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD7Q9P2D1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 AC106795.1-205ENST00000512851 1056 ntBASIC20.57■□□□□ 0.88
CHD7Q9P2D1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD7Q9P2D1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms