Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 KRT8P8-201ENST00000434750 1448 ntBASIC19.74■□□□□ 0.75
UBP1Q9NZI7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBP1Q9NZI7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 KRASP1-201ENST00000407852 552 ntBASIC19.73■□□□□ 0.75
UBP1Q9NZI7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBP1Q9NZI7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 ZNF815P-204ENST00000434898 1737 ntBASIC19.72■□□□□ 0.75
UBP1Q9NZI7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UBP1Q9NZI7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 AC239809.2-201ENST00000415381 517 ntBASIC19.71■□□□□ 0.75
UBP1Q9NZI7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.71■□□□□ 0.75
UBP1Q9NZI7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.71■□□□□ 0.75
UBP1Q9NZI7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 LINC01465-201ENST00000408887 1940 ntBASIC19.7■□□□□ 0.74
UBP1Q9NZI7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 FAM201B-201ENST00000458407 597 ntBASIC19.7■□□□□ 0.74
UBP1Q9NZI7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 RN7SL471P-201ENST00000580476 299 ntBASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBP1Q9NZI7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms