Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 AC141586.3-201ENST00000562166 1838 ntBASIC18.75■□□□□ 0.59
NDE1Q9NXR1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 PBX2P1-201ENST00000493219 1291 ntBASIC18.75■□□□□ 0.59
NDE1Q9NXR1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NDE1Q9NXR1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 AC068880.1-201ENST00000507289 2297 ntBASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 HLA-G-202ENST00000376815 851 ntBASIC18.74■□□□□ 0.59
NDE1Q9NXR1 HLA-G-203ENST00000376818 1127 ntBASIC18.74■□□□□ 0.59
NDE1Q9NXR1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDE1Q9NXR1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 AL354751.1-201ENST00000412768 1863 ntBASIC18.73■□□□□ 0.59
NDE1Q9NXR1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.73■□□□□ 0.59
NDE1Q9NXR1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 AC106739.1-201ENST00000617035 715 ntBASIC18.73■□□□□ 0.59
NDE1Q9NXR1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NDE1Q9NXR1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 WIZP1-201ENST00000531444 2299 ntBASIC18.72■□□□□ 0.59
NDE1Q9NXR1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 BICD1-207ENST00000551848 1962 ntBASIC18.72■□□□□ 0.59
NDE1Q9NXR1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms