Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 AC007952.6-201ENST00000573168 2673 ntBASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 AC003957.1-201ENST00000625108 2673 ntBASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN4Q9NRR5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 AC005332.7-201ENST00000614046 2005 ntBASIC17.83■□□□□ 0.45
UBQLN4Q9NRR5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN4Q9NRR5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN4Q9NRR5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 FAM197Y4-202ENST00000622692 608 ntBASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 AC104417.2-201ENST00000562989 1793 ntBASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBQLN4Q9NRR5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 AL032819.2-201ENST00000624543 2162 ntBASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 PRORSD1P-201ENST00000295112 541 ntBASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 AL359736.2-201ENST00000621992 437 ntBASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN4Q9NRR5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms