Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 KRT18P21-201ENST00000515767 1272 ntBASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF4Q9NR80 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF4Q9NR80 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF4Q9NR80 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 MIR1224-201ENST00000408193 85 ntBASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 AL353708.3-201ENST00000610272 989 ntBASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ARHGEF4Q9NR80 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 AC097493.4-201ENST00000641197 219 ntBASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
ARHGEF4Q9NR80 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms