Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 KRT8P33-201ENST00000508125 1423 ntBASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 NTF6A-201ENST00000591175 560 ntBASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VCX3AQ9NNX9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 OR6D1P-203ENST00000641209 4860 ntBASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 AL356309.3-201ENST00000624132 1934 ntBASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.08■□□□□ 0.49
VCX3AQ9NNX9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 AC046158.3-201ENST00000624947 2558 ntBASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.08■□□□□ 0.48
VCX3AQ9NNX9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 TSPY13P-201ENST00000338964 914 ntBASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 AC092171.4-201ENST00000609130 632 ntBASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3AQ9NNX9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3AQ9NNX9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms