Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.28■■□□□ 1
VPS16Q9H269 RPS2P52-201ENST00000469610 820 ntBASIC21.28■■□□□ 1
VPS16Q9H269 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS16Q9H269 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.28■■□□□ 1
VPS16Q9H269 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.28■■□□□ 1
VPS16Q9H269 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS16Q9H269 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.27■■□□□ 1
VPS16Q9H269 AC020763.4-201ENST00000623414 4170 ntBASIC21.27■■□□□ 1
VPS16Q9H269 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
VPS16Q9H269 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.27■■□□□ 1
VPS16Q9H269 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VPS16Q9H269 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.27■■□□□ 1
VPS16Q9H269 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS16Q9H269 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.27■■□□□ 1
VPS16Q9H269 AL121832.2-201ENST00000610979 668 ntBASIC21.27■■□□□ 1
VPS16Q9H269 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.27■■□□□ 1
VPS16Q9H269 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS16Q9H269 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS16Q9H269 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS16Q9H269 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
VPS16Q9H269 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VPS16Q9H269 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
VPS16Q9H269 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VPS16Q9H269 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS16Q9H269 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.26■□□□□ 0.99
VPS16Q9H269 AC091874.3-201ENST00000512672 1195 ntBASIC21.26■□□□□ 0.99
VPS16Q9H269 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
VPS16Q9H269 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.26■□□□□ 0.99
VPS16Q9H269 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS16Q9H269 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS16Q9H269 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
VPS16Q9H269 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VPS16Q9H269 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS16Q9H269 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS16Q9H269 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 AC006333.2-201ENST00000607957 2099 ntBASIC21.25■□□□□ 0.99
VPS16Q9H269 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
VPS16Q9H269 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS16Q9H269 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VPS16Q9H269 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS16Q9H269 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS16Q9H269 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS16Q9H269 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VPS16Q9H269 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS16Q9H269 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS16Q9H269 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
VPS16Q9H269 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS16Q9H269 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
VPS16Q9H269 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS16Q9H269 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS16Q9H269 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VPS16Q9H269 AC006970.2-201ENST00000450065 779 ntBASIC21.24■□□□□ 0.99
VPS16Q9H269 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.24■□□□□ 0.99
VPS16Q9H269 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.24■□□□□ 0.99
VPS16Q9H269 AC092118.2-201ENST00000613495 667 ntBASIC21.24■□□□□ 0.99
VPS16Q9H269 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.24■□□□□ 0.99
VPS16Q9H269 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS16Q9H269 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS16Q9H269 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 SDHAP1-207ENST00000440850 2000 ntBASIC21.23■□□□□ 0.99
VPS16Q9H269 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS16Q9H269 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS16Q9H269 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms