Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP28Q9H239 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP28Q9H239 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 DPP3P2-201ENST00000416030 1696 ntBASIC17.06■□□□□ 0.32
MMP28Q9H239 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
MMP28Q9H239 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP28Q9H239 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP28Q9H239 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP28Q9H239 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP28Q9H239 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
MMP28Q9H239 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.05■□□□□ 0.32
MMP28Q9H239 KRT18P20-201ENST00000548986 1279 ntBASIC17.05■□□□□ 0.32
MMP28Q9H239 KRT18P61-201ENST00000585825 1298 ntBASIC17.05■□□□□ 0.32
MMP28Q9H239 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 BICD1-207ENST00000551848 1962 ntBASIC17.05■□□□□ 0.32
MMP28Q9H239 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MMP28Q9H239 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP28Q9H239 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP28Q9H239 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP28Q9H239 KRT16P2-201ENST00000414673 1423 ntBASIC17.04■□□□□ 0.32
MMP28Q9H239 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
MMP28Q9H239 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP28Q9H239 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP28Q9H239 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
MMP28Q9H239 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP28Q9H239 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP28Q9H239 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP28Q9H239 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.03■□□□□ 0.32
MMP28Q9H239 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP28Q9H239 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MMP28Q9H239 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 MIR2861-201ENST00000636310 90 ntBASIC17.03■□□□□ 0.32
MMP28Q9H239 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP28Q9H239 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
MMP28Q9H239 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MMP28Q9H239 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
MMP28Q9H239 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP28Q9H239 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MMP28Q9H239 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP28Q9H239 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms