Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 AC073912.3-201ENST00000624414 853 ntBASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 AFG3L1P-217ENST00000557444 2447 ntBASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3FQ9H1D9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 UNC93B2-201ENST00000285383 730 ntBASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 AC008040.2-201ENST00000461049 708 ntBASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 AC011298.2-201ENST00000617989 482 ntBASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 ZNF815P-204ENST00000434898 1737 ntBASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.37■■□□□ 1.01
POLR3FQ9H1D9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 AC004951.3-201ENST00000418645 1148 ntBASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.36■■□□□ 1.01
POLR3FQ9H1D9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 AC130371.2-201ENST00000619443 611 ntBASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 AC104417.2-201ENST00000562989 1793 ntBASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.35■■□□□ 1.01
POLR3FQ9H1D9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 AL390955.1-201ENST00000428694 934 ntBASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 AC091390.4-202ENST00000476426 537 ntBASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR3FQ9H1D9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms