Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
SMOQ99835 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMOQ99835 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.38■□□□□ 0.85
SMOQ99835 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMOQ99835 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.37■□□□□ 0.85
SMOQ99835 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
SMOQ99835 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMOQ99835 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.37■□□□□ 0.85
SMOQ99835 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.37■□□□□ 0.85
SMOQ99835 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SMOQ99835 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMOQ99835 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.37■□□□□ 0.85
SMOQ99835 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SMOQ99835 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.36■□□□□ 0.85
SMOQ99835 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.36■□□□□ 0.85
SMOQ99835 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.36■□□□□ 0.85
SMOQ99835 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMOQ99835 KRT8P9-201ENST00000558927 1449 ntBASIC20.36■□□□□ 0.85
SMOQ99835 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.35■□□□□ 0.85
SMOQ99835 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.35■□□□□ 0.85
SMOQ99835 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 AL390955.1-201ENST00000428694 934 ntBASIC20.35■□□□□ 0.85
SMOQ99835 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.35■□□□□ 0.85
SMOQ99835 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 AP000692.2-201ENST00000608391 879 ntBASIC20.35■□□□□ 0.85
SMOQ99835 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 SDHAP1-207ENST00000440850 2000 ntBASIC20.35■□□□□ 0.85
SMOQ99835 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.35■□□□□ 0.85
SMOQ99835 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMOQ99835 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 MIR1238-201ENST00000408483 83 ntBASIC20.34■□□□□ 0.85
SMOQ99835 AC087499.1-201ENST00000418141 1075 ntBASIC20.34■□□□□ 0.85
SMOQ99835 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.34■□□□□ 0.85
SMOQ99835 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.34■□□□□ 0.85
SMOQ99835 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMOQ99835 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMOQ99835 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
SMOQ99835 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
SMOQ99835 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.33■□□□□ 0.85
SMOQ99835 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
SMOQ99835 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.33■□□□□ 0.85
SMOQ99835 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 MMP23A-201ENST00000234610 1017 ntBASIC20.33■□□□□ 0.85
SMOQ99835 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms