Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE1Q99829 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE1Q99829 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE1Q99829 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE1Q99829 YBX1P10-201ENST00000444752 975 ntBASIC19.37■□□□□ 0.69
CPNE1Q99829 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE1Q99829 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.37■□□□□ 0.69
CPNE1Q99829 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE1Q99829 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE1Q99829 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE1Q99829 AC104417.2-201ENST00000562989 1793 ntBASIC19.37■□□□□ 0.69
CPNE1Q99829 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CPNE1Q99829 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.36■□□□□ 0.69
CPNE1Q99829 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 KRT8P8-201ENST00000434750 1448 ntBASIC19.36■□□□□ 0.69
CPNE1Q99829 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 SLC29A4P1-201ENST00000398760 971 ntBASIC19.36■□□□□ 0.69
CPNE1Q99829 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.36■□□□□ 0.69
CPNE1Q99829 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.36■□□□□ 0.69
CPNE1Q99829 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CPNE1Q99829 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE1Q99829 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE1Q99829 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE1Q99829 AC006333.2-201ENST00000607957 2099 ntBASIC19.36■□□□□ 0.69
CPNE1Q99829 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPNE1Q99829 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
CPNE1Q99829 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE1Q99829 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE1Q99829 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 GUSBP6-202ENST00000438529 1198 ntBASIC19.35■□□□□ 0.69
CPNE1Q99829 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE1Q99829 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE1Q99829 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 HLA-B-256ENST00000639848 1089 ntBASIC19.35■□□□□ 0.69
CPNE1Q99829 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE1Q99829 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 AC092368.3-202ENST00000574180 1591 ntBASIC19.35■□□□□ 0.69
CPNE1Q99829 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE1Q99829 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE1Q99829 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPNE1Q99829 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE1Q99829 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE1Q99829 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE1Q99829 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE1Q99829 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE1Q99829 MIR4758-201ENST00000577688 71 ntBASIC19.34■□□□□ 0.69
CPNE1Q99829 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE1Q99829 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE1Q99829 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE1Q99829 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.34■□□□□ 0.69
CPNE1Q99829 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE1Q99829 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE1Q99829 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE1Q99829 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE1Q99829 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE1Q99829 SDHAP1-207ENST00000440850 2000 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms