Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40CQ96S21 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB40CQ96S21 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AC093525.10-201ENST00000625130 1569 ntBASIC15.71■□□□□ 0.11
RAB40CQ96S21 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AL162412.1-201ENST00000567129 965 ntBASIC15.71■□□□□ 0.11
RAB40CQ96S21 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 AL031598.1-201ENST00000561511 1773 ntBASIC15.71■□□□□ 0.11
RAB40CQ96S21 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB40CQ96S21 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40CQ96S21 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40CQ96S21 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.71■□□□□ 0.1
RAB40CQ96S21 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.71■□□□□ 0.1
RAB40CQ96S21 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.71■□□□□ 0.1
RAB40CQ96S21 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB40CQ96S21 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40CQ96S21 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
RAB40CQ96S21 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 TEX21P-204ENST00000641479 1693 ntBASIC15.7■□□□□ 0.1
RAB40CQ96S21 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 HTR7P1-202ENST00000624664 4411 ntBASIC15.7■□□□□ 0.1
RAB40CQ96S21 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 WIZP1-201ENST00000531444 2299 ntBASIC15.7■□□□□ 0.1
RAB40CQ96S21 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40CQ96S21 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40CQ96S21 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms