Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS4Q96RK4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BBS4Q96RK4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 Z82202.1-201ENST00000623446 1880 ntBASIC18.35■□□□□ 0.53
BBS4Q96RK4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 KRT17P3-201ENST00000420566 1262 ntBASIC18.35■□□□□ 0.53
BBS4Q96RK4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.35■□□□□ 0.53
BBS4Q96RK4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS4Q96RK4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 AC026366.1-201ENST00000488803 879 ntBASIC18.34■□□□□ 0.53
BBS4Q96RK4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 AC008403.3-201ENST00000598924 454 ntBASIC18.34■□□□□ 0.53
BBS4Q96RK4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BBS4Q96RK4 AL032819.2-201ENST00000624543 2162 ntBASIC18.34■□□□□ 0.53
BBS4Q96RK4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BBS4Q96RK4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
BBS4Q96RK4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BBS4Q96RK4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.33■□□□□ 0.53
BBS4Q96RK4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BBS4Q96RK4 KRT8P8-201ENST00000434750 1448 ntBASIC18.33■□□□□ 0.53
BBS4Q96RK4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BBS4Q96RK4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BBS4Q96RK4 AC020763.4-201ENST00000623414 4170 ntBASIC18.33■□□□□ 0.53
BBS4Q96RK4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BBS4Q96RK4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BBS4Q96RK4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BBS4Q96RK4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.33■□□□□ 0.52
BBS4Q96RK4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms