Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.61■□□□□ 0.41
SNX18Q96RF0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SNX18Q96RF0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 AC073210.2-201ENST00000430369 194 ntBASIC17.6■□□□□ 0.41
SNX18Q96RF0 AC069152.1-201ENST00000438030 544 ntBASIC17.6■□□□□ 0.41
SNX18Q96RF0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 KRT18P6-201ENST00000555540 1265 ntBASIC17.6■□□□□ 0.41
SNX18Q96RF0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SNX18Q96RF0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX18Q96RF0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AL138781.2-201ENST00000617896 1843 ntBASIC17.59■□□□□ 0.41
SNX18Q96RF0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 MKRN4P-201ENST00000444706 1521 ntBASIC17.59■□□□□ 0.41
SNX18Q96RF0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 TSPY20P-201ENST00000450910 630 ntBASIC17.59■□□□□ 0.41
SNX18Q96RF0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 AC098934.4-201ENST00000564127 592 ntBASIC17.59■□□□□ 0.41
SNX18Q96RF0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX18Q96RF0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX18Q96RF0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.58■□□□□ 0.41
SNX18Q96RF0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX18Q96RF0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 AC133041.1-202ENST00000642053 222 ntBASIC17.58■□□□□ 0.4
SNX18Q96RF0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX18Q96RF0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX18Q96RF0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 AC093484.2-201ENST00000580996 2166 ntBASIC17.57■□□□□ 0.4
SNX18Q96RF0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms