Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AL353719.1-201ENST00000566847 864 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 KRT18P31-201ENST00000506277 1292 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AL160237.2-201ENST00000556165 472 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 AF228730.7-201ENST00000641842 219 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 LINC01311-201ENST00000565162 1445 ntBASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CSMD1Q96PZ7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 AC079781.3-201ENST00000449110 356 ntBASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.52■□□□□ 0.24
CSMD1Q96PZ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CSMD1Q96PZ7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 AP003041.3-201ENST00000527151 707 ntBASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSMD1Q96PZ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 AC016734.2-201ENST00000624325 1377 ntBASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 AC004951.3-201ENST00000418645 1148 ntBASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 AC079776.4-201ENST00000511039 504 ntBASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 AC112907.3-201ENST00000577781 2400 ntBASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms