Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 AP000525.1-201ENST00000608286 694 ntBASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 AC079598.2-202ENST00000546624 1451 ntBASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCD1Q96GM5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 AC130371.2-201ENST00000619443 611 ntBASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.41■□□□□ 0.86
SMARCD1Q96GM5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 AC104417.2-201ENST00000562989 1793 ntBASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SMARCD1Q96GM5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCD1Q96GM5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCD1Q96GM5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCD1Q96GM5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCD1Q96GM5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCD1Q96GM5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 AC091390.4-202ENST00000476426 537 ntBASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCD1Q96GM5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms