Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
USP13Q92995 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
USP13Q92995 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 KRT18P57-201ENST00000443599 1254 ntBASIC20.28■□□□□ 0.84
USP13Q92995 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.28■□□□□ 0.84
USP13Q92995 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP13Q92995 AC130371.2-201ENST00000619443 611 ntBASIC20.28■□□□□ 0.84
USP13Q92995 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP13Q92995 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
USP13Q92995 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.27■□□□□ 0.84
USP13Q92995 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.27■□□□□ 0.84
USP13Q92995 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
USP13Q92995 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
USP13Q92995 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.27■□□□□ 0.84
USP13Q92995 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 TERF1P1-201ENST00000311003 1181 ntBASIC20.27■□□□□ 0.84
USP13Q92995 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
USP13Q92995 SLC25A3P1-201ENST00000443844 931 ntBASIC20.27■□□□□ 0.84
USP13Q92995 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.27■□□□□ 0.84
USP13Q92995 AC097488.1-201ENST00000507834 756 ntBASIC20.27■□□□□ 0.84
USP13Q92995 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.27■□□□□ 0.84
USP13Q92995 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USP13Q92995 AL445228.2-201ENST00000605589 952 ntBASIC20.27■□□□□ 0.84
USP13Q92995 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.27■□□□□ 0.84
USP13Q92995 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.27■□□□□ 0.84
USP13Q92995 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP13Q92995 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP13Q92995 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP13Q92995 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
USP13Q92995 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP13Q92995 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
USP13Q92995 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
USP13Q92995 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.26■□□□□ 0.83
USP13Q92995 RCC2P6-201ENST00000526625 1557 ntBASIC20.26■□□□□ 0.83
USP13Q92995 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP13Q92995 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
USP13Q92995 CRYGFP-201ENST00000418459 633 ntBASIC20.26■□□□□ 0.83
USP13Q92995 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP13Q92995 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.26■□□□□ 0.83
USP13Q92995 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.26■□□□□ 0.83
USP13Q92995 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP13Q92995 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.26■□□□□ 0.83
USP13Q92995 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP13Q92995 AC073508.3-201ENST00000619697 1419 ntBASIC20.26■□□□□ 0.83
USP13Q92995 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.26■□□□□ 0.83
USP13Q92995 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.25■□□□□ 0.83
USP13Q92995 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 AL137013.1-201ENST00000432946 1228 ntBASIC20.25■□□□□ 0.83
USP13Q92995 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.25■□□□□ 0.83
USP13Q92995 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.25■□□□□ 0.83
USP13Q92995 AC008040.2-201ENST00000461049 708 ntBASIC20.25■□□□□ 0.83
USP13Q92995 C2orf69P3-201ENST00000565542 1120 ntBASIC20.25■□□□□ 0.83
USP13Q92995 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.25■□□□□ 0.83
USP13Q92995 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP13Q92995 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP13Q92995 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
USP13Q92995 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms