Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS1Q92902 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS1Q92902 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS1Q92902 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS1Q92902 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 AC105036.2-201ENST00000569468 176 ntBASIC17.64■□□□□ 0.41
HPS1Q92902 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 TMEM191A-211ENST00000637163 1067 ntBASIC17.64■□□□□ 0.41
HPS1Q92902 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS1Q92902 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 BCL2-203ENST00000589955 5011 ntBASIC17.64■□□□□ 0.41
HPS1Q92902 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HPS1Q92902 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS1Q92902 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.63■□□□□ 0.41
HPS1Q92902 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 AC069152.1-201ENST00000438030 544 ntBASIC17.63■□□□□ 0.41
HPS1Q92902 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS1Q92902 KRT18P6-201ENST00000555540 1265 ntBASIC17.63■□□□□ 0.41
HPS1Q92902 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS1Q92902 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS1Q92902 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS1Q92902 Z82202.1-201ENST00000623446 1880 ntBASIC17.63■□□□□ 0.41
HPS1Q92902 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS1Q92902 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS1Q92902 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS1Q92902 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HPS1Q92902 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS1Q92902 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS1Q92902 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS1Q92902 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS1Q92902 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.62■□□□□ 0.41
HPS1Q92902 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HPS1Q92902 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.62■□□□□ 0.41
HPS1Q92902 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HPS1Q92902 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HPS1Q92902 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 FP700111.2-201ENST00000619190 1892 ntBASIC17.61■□□□□ 0.41
HPS1Q92902 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms