Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB3Q92617 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB3Q92617 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 MKRN4P-201ENST00000444706 1521 ntBASIC15.28■□□□□ 0.04
NPIPB3Q92617 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 AL390719.1-204ENST00000412397 1219 ntBASIC15.28■□□□□ 0.04
NPIPB3Q92617 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPB3Q92617 TFP1-202ENST00000475455 1573 ntBASIC15.28■□□□□ 0.04
NPIPB3Q92617 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 BX276092.2-201ENST00000417668 665 ntBASIC15.27■□□□□ 0.04
NPIPB3Q92617 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.27■□□□□ 0.04
NPIPB3Q92617 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.27■□□□□ 0.04
NPIPB3Q92617 AC105036.2-201ENST00000569468 176 ntBASIC15.27■□□□□ 0.04
NPIPB3Q92617 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPB3Q92617 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB3Q92617 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB3Q92617 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB3Q92617 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB3Q92617 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB3Q92617 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NPIPB3Q92617 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB3Q92617 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB3Q92617 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms