Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.69■□□□□ 0.9
SHC3Q92529 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.69■□□□□ 0.9
SHC3Q92529 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.69■□□□□ 0.9
SHC3Q92529 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 AC128676.1-201ENST00000454392 318 ntBASIC20.69■□□□□ 0.9
SHC3Q92529 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.69■□□□□ 0.9
SHC3Q92529 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 HLA-A-209ENST00000638375 975 ntBASIC20.69■□□□□ 0.9
SHC3Q92529 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SHC3Q92529 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SHC3Q92529 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC3Q92529 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC3Q92529 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 LINC01465-201ENST00000408887 1940 ntBASIC20.68■□□□□ 0.9
SHC3Q92529 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC3Q92529 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
SHC3Q92529 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.67■□□□□ 0.9
SHC3Q92529 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.67■□□□□ 0.9
SHC3Q92529 KRT16P5-201ENST00000455284 522 ntBASIC20.67■□□□□ 0.9
SHC3Q92529 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SHC3Q92529 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.67■□□□□ 0.9
SHC3Q92529 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SHC3Q92529 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC3Q92529 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC3Q92529 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHC3Q92529 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC3Q92529 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
SHC3Q92529 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SHC3Q92529 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SHC3Q92529 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.66■□□□□ 0.9
SHC3Q92529 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms