Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HMGB4Q8WW32 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGB4Q8WW32 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGB4Q8WW32 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 AL512604.3-201ENST00000569583 964 ntBASIC19.44■□□□□ 0.7
HMGB4Q8WW32 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGB4Q8WW32 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 AC140113.3-201ENST00000605663 199 ntBASIC19.43■□□□□ 0.7
HMGB4Q8WW32 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 AC020907.5-201ENST00000624372 1936 ntBASIC19.43■□□□□ 0.7
HMGB4Q8WW32 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB4Q8WW32 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 AL023973.1-201ENST00000624619 620 ntBASIC19.42■□□□□ 0.7
HMGB4Q8WW32 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 AL031432.5-201ENST00000641059 760 ntBASIC19.42■□□□□ 0.7
HMGB4Q8WW32 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB4Q8WW32 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AL359075.1-203ENST00000462729 1002 ntBASIC19.41■□□□□ 0.7
HMGB4Q8WW32 CA15P1-201ENST00000481698 905 ntBASIC19.41■□□□□ 0.7
HMGB4Q8WW32 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AP003041.3-201ENST00000527151 707 ntBASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms