Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 TSPY21P-201ENST00000433481 731 ntBASIC17.57■□□□□ 0.4
RNF138Q8WVD3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AL355075.4-201ENST00000554988 638 ntBASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AC011298.2-201ENST00000617989 482 ntBASIC17.57■□□□□ 0.4
RNF138Q8WVD3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF138Q8WVD3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 AC096733.2-201ENST00000609937 1394 ntBASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 RBM17P1-201ENST00000453646 1190 ntBASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF138Q8WVD3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 TEX21P-204ENST00000641479 1693 ntBASIC17.55■□□□□ 0.4
RNF138Q8WVD3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 TSPY23P-201ENST00000440136 739 ntBASIC17.55■□□□□ 0.4
RNF138Q8WVD3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RNF138Q8WVD3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 TSPY15P-201ENST00000457163 923 ntBASIC17.54■□□□□ 0.4
RNF138Q8WVD3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 AP005242.2-201ENST00000580065 1175 ntBASIC17.54■□□□□ 0.4
RNF138Q8WVD3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 AC079598.2-202ENST00000546624 1451 ntBASIC17.54■□□□□ 0.4
RNF138Q8WVD3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 KRT8P11-201ENST00000409686 1436 ntBASIC17.54■□□□□ 0.4
RNF138Q8WVD3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF138Q8WVD3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF138Q8WVD3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms