Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPS4Y2Q8TD47 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC104417.2-201ENST00000562989 1793 ntBASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC080038.1-201ENST00000611274 1154 ntBASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC231657.2-201ENST00000624556 255 ntBASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC090164.3-201ENST00000610780 2143 ntBASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 AC104581.1-202ENST00000635932 2618 ntBASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPS4Y2Q8TD47 LETM1P2-201ENST00000597330 2178 ntBASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 WIZP1-201ENST00000531444 2299 ntBASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPS4Y2Q8TD47 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RPS4Y2Q8TD47 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPS4Y2Q8TD47 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPS4Y2Q8TD47 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.96■□□□□ 0.3
RPS4Y2Q8TD47 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AL512353.2-201ENST00000448759 1962 ntBASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AC093787.1-201ENST00000450396 207 ntBASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 AC090192.1-201ENST00000517740 490 ntBASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4Y2Q8TD47 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.94■□□□□ 0.3
RPS4Y2Q8TD47 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4Y2Q8TD47 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4Y2Q8TD47 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.94■□□□□ 0.3
RPS4Y2Q8TD47 SDHAP1-207ENST00000440850 2000 ntBASIC16.94■□□□□ 0.3
RPS4Y2Q8TD47 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms