Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 Z82202.1-201ENST00000623446 1880 ntBASIC20.55■□□□□ 0.88
UBA3Q8TBC4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AP002982.1-201ENST00000492365 877 ntBASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AF186192.3-201ENST00000583427 947 ntBASIC20.54■□□□□ 0.88
UBA3Q8TBC4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.54■□□□□ 0.88
UBA3Q8TBC4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.54■□□□□ 0.88
UBA3Q8TBC4 AC093484.2-201ENST00000580996 2166 ntBASIC20.53■□□□□ 0.88
UBA3Q8TBC4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 RPS2P55-201ENST00000397318 883 ntBASIC20.53■□□□□ 0.88
UBA3Q8TBC4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 AC107956.1-201ENST00000494359 873 ntBASIC20.53■□□□□ 0.88
UBA3Q8TBC4 AC008550.1-201ENST00000511500 884 ntBASIC20.53■□□□□ 0.88
UBA3Q8TBC4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.53■□□□□ 0.88
UBA3Q8TBC4 ZNF815P-204ENST00000434898 1737 ntBASIC20.53■□□□□ 0.88
UBA3Q8TBC4 AC116562.4-201ENST00000641316 2276 ntBASIC20.52■□□□□ 0.88
UBA3Q8TBC4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBA3Q8TBC4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.52■□□□□ 0.87
UBA3Q8TBC4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 NIFKP9-201ENST00000419265 221 ntBASIC20.51■□□□□ 0.87
UBA3Q8TBC4 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AC066615.1-201ENST00000640911 628 ntBASIC20.51■□□□□ 0.87
UBA3Q8TBC4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AC104417.2-201ENST00000562989 1793 ntBASIC20.51■□□□□ 0.87
UBA3Q8TBC4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UBA3Q8TBC4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms