Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.1■□□□□ 0.01
LINC01006Q8NI28 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 AL359075.1-203ENST00000462729 1002 ntBASIC15.1■□□□□ 0.01
LINC01006Q8NI28 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 FAM86EP-206ENST00000510506 987 ntBASIC15.1■□□□□ 0.01
LINC01006Q8NI28 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01006Q8NI28 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AL691432.2-201ENST00000607222 2038 ntBASIC15.09■□□□□ 0.01
LINC01006Q8NI28 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AC009947.2-201ENST00000444014 672 ntBASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AL671277.2-201ENST00000458060 996 ntBASIC15.09■□□□□ 0.01
LINC01006Q8NI28 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 AC009237.14-201ENST00000609975 1594 ntBASIC15.09■□□□□ 0.01
LINC01006Q8NI28 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 KRT8P45-201ENST00000414328 1447 ntBASIC15.09■□□□□ 0.01
LINC01006Q8NI28 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01006Q8NI28 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01006Q8NI28 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.08■□□□□ 0
LINC01006Q8NI28 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 KRT18P56-201ENST00000507275 550 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.08■□□□□ 0
LINC01006Q8NI28 PRSS44-201ENST00000515154 1146 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 AC008622.2-201ENST00000617006 1229 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LINC01006Q8NI28 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.08■□□□□ 0
LINC01006Q8NI28 IER3-202ENST00000376377 1350 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.08■□□□□ 0
LINC01006Q8NI28 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
LINC01006Q8NI28 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 AC073314.1-201ENST00000568729 2216 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01006Q8NI28 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LINC01006Q8NI28 KRT8P11-201ENST00000409686 1436 ntBASIC15.08■□□□□ 0
LINC01006Q8NI28 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC01006Q8NI28 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
LINC01006Q8NI28 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LINC01006Q8NI28 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms