Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC30.41■■■□□ 2.46
CFAP43Q8NDM7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC30.41■■■□□ 2.46
CFAP43Q8NDM7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.4■■■□□ 2.46
CFAP43Q8NDM7 FDX1P1-201ENST00000449115 551 ntBASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 AL512604.3-201ENST00000569583 964 ntBASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CFAP43Q8NDM7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 ZNF444P1-201ENST00000559497 298 ntBASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 AL136038.3-201ENST00000561909 1096 ntBASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.45
CFAP43Q8NDM7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AC008040.2-201ENST00000461049 708 ntBASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CFAP43Q8NDM7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CFAP43Q8NDM7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 KRT8P10-201ENST00000450021 1447 ntBASIC30.36■■■□□ 2.45
CFAP43Q8NDM7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.35■■■□□ 2.45
CFAP43Q8NDM7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms