Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC197Q8NCU1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 AC233992.3-201ENST00000607491 485 ntBASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC197Q8NCU1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 AC091799.1-201ENST00000422823 811 ntBASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 AC138907.5-202ENST00000569484 235 ntBASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC197Q8NCU1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC197Q8NCU1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.21■□□□□ 0.66
CCDC197Q8NCU1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms