Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 BX088651.1-201ENST00000540551 451 ntBASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF39Q8N4T4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ARHGEF39Q8N4T4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF39Q8N4T4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF39Q8N4T4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF39Q8N4T4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.33■□□□□ 0.53
ARHGEF39Q8N4T4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF39Q8N4T4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 AC091390.4-202ENST00000476426 537 ntBASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 AL158211.5-201ENST00000623583 2518 ntBASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF39Q8N4T4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 DGCR10-201ENST00000609839 495 ntBASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
ARHGEF39Q8N4T4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 AC004951.3-201ENST00000418645 1148 ntBASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 AP000692.2-201ENST00000608391 879 ntBASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 Z82202.1-201ENST00000623446 1880 ntBASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 SDHAP1-207ENST00000440850 2000 ntBASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ARHGEF39Q8N4T4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms