Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00528Q8N1L1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00528Q8N1L1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00528Q8N1L1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LINC00528Q8N1L1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00528Q8N1L1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00528Q8N1L1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 PGM5P4-201ENST00000421970 445 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 TSPY7P-201ENST00000431358 1114 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 FAM210CP-201ENST00000445714 574 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC019227.1-201ENST00000526902 510 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC079414.2-201ENST00000567157 1104 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC233702.5-201ENST00000584107 538 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AP001412.1-201ENST00000608405 714 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AP000720.1-201ENST00000625091 483 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AL023875.1-201ENST00000640777 796 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 KRT17P2-201ENST00000300992 1314 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 AC098818.2-201ENST00000564925 2320 ntBASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
LINC00528Q8N1L1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 RPS2P55-201ENST00000397318 883 ntBASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 AC107956.1-201ENST00000494359 873 ntBASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 BX088651.1-201ENST00000540551 451 ntBASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 AC087633.2-202ENST00000565166 1439 ntBASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00528Q8N1L1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms