Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SMG8-203ENST00000578922 2178 ntBASIC28.83■■■□□ 2.21
ABCA6Q8N139 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ABCA6Q8N139 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
ABCA6Q8N139 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ABCA6Q8N139 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC28.82■■■□□ 2.2
ABCA6Q8N139 AC016734.2-201ENST00000624325 1377 ntBASIC28.82■■■□□ 2.2
ABCA6Q8N139 AC093525.10-201ENST00000625130 1569 ntBASIC28.82■■■□□ 2.2
ABCA6Q8N139 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC28.82■■■□□ 2.2
ABCA6Q8N139 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
ABCA6Q8N139 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 AL022342.1-201ENST00000400363 863 ntBASIC28.81■■■□□ 2.2
ABCA6Q8N139 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC28.81■■■□□ 2.2
ABCA6Q8N139 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC28.81■■■□□ 2.2
ABCA6Q8N139 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC28.81■■■□□ 2.2
ABCA6Q8N139 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC28.81■■■□□ 2.2
ABCA6Q8N139 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC28.81■■■□□ 2.2
ABCA6Q8N139 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ABCA6Q8N139 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 TSSC2-201ENST00000450217 709 ntBASIC28.8■■■□□ 2.2
ABCA6Q8N139 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCA6Q8N139 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC28.8■■■□□ 2.2
ABCA6Q8N139 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.79■■■□□ 2.2
ABCA6Q8N139 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC28.79■■■□□ 2.2
ABCA6Q8N139 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.79■■■□□ 2.2
ABCA6Q8N139 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
ABCA6Q8N139 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC28.79■■■□□ 2.2
ABCA6Q8N139 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 AL671883.3-201ENST00000603274 991 ntBASIC28.78■■■□□ 2.2
ABCA6Q8N139 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ABCA6Q8N139 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
ABCA6Q8N139 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 AC036111.1-201ENST00000533973 1582 ntBASIC28.77■■■□□ 2.2
ABCA6Q8N139 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 TSPY12P-201ENST00000421279 868 ntBASIC28.77■■■□□ 2.2
ABCA6Q8N139 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
ABCA6Q8N139 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ABCA6Q8N139 KRT18P1-202ENST00000452408 1331 ntBASIC28.77■■■□□ 2.2
ABCA6Q8N139 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.2
ABCA6Q8N139 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ABCA6Q8N139 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ABCA6Q8N139 EMBP1-201ENST00000458200 901 ntBASIC28.76■■■□□ 2.2
ABCA6Q8N139 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ABCA6Q8N139 TPSP2-201ENST00000561760 610 ntBASIC28.76■■■□□ 2.2
ABCA6Q8N139 AL121672.3-201ENST00000608644 468 ntBASIC28.76■■■□□ 2.2
ABCA6Q8N139 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC28.76■■■□□ 2.2
ABCA6Q8N139 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
ABCA6Q8N139 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCA6Q8N139 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms