Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 AL136038.3-201ENST00000561909 1096 ntBASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL27A1Q8IZC6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 GCSHP2-201ENST00000560971 527 ntBASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL27A1Q8IZC6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 AL512408.1-201ENST00000569378 2000 ntBASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL27A1Q8IZC6 AC036111.1-201ENST00000533973 1582 ntBASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 ATP5G2P1-201ENST00000433580 426 ntBASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 CR769767.2-201ENST00000622735 460 ntBASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL27A1Q8IZC6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 AC009237.14-201ENST00000609975 1594 ntBASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.3■□□□□ 0.52
COL27A1Q8IZC6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 AC104417.2-201ENST00000562989 1793 ntBASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.29■□□□□ 0.52
COL27A1Q8IZC6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms