Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C9orf40Q8IXQ3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 MESTP1-201ENST00000404287 994 ntBASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 REXO1L12P-201ENST00000622156 912 ntBASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 KRT17P2-201ENST00000300992 1314 ntBASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C9orf40Q8IXQ3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 AC116562.2-201ENST00000507042 360 ntBASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 RCC2P6-201ENST00000526625 1557 ntBASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.9■□□□□ 0.46
C9orf40Q8IXQ3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
C9orf40Q8IXQ3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
C9orf40Q8IXQ3 SDHAP1-207ENST00000440850 2000 ntBASIC17.89■□□□□ 0.46
C9orf40Q8IXQ3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
C9orf40Q8IXQ3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 Z82202.1-201ENST00000623446 1880 ntBASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 AC011506.1-201ENST00000474329 610 ntBASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 AL355075.4-201ENST00000554988 638 ntBASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 MIR6786-201ENST00000616843 113 ntBASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
C9orf40Q8IXQ3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms