Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.16■□□□□ 0.66
APLFQ8IW19 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APLFQ8IW19 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
APLFQ8IW19 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
APLFQ8IW19 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.15■□□□□ 0.66
APLFQ8IW19 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.15■□□□□ 0.66
APLFQ8IW19 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.15■□□□□ 0.66
APLFQ8IW19 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.15■□□□□ 0.66
APLFQ8IW19 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.15■□□□□ 0.66
APLFQ8IW19 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.15■□□□□ 0.66
APLFQ8IW19 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APLFQ8IW19 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APLFQ8IW19 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
APLFQ8IW19 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
APLFQ8IW19 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APLFQ8IW19 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.14■□□□□ 0.66
APLFQ8IW19 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
APLFQ8IW19 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
APLFQ8IW19 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 AL390961.4-201ENST00000623958 2535 ntBASIC19.14■□□□□ 0.65
APLFQ8IW19 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
APLFQ8IW19 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
APLFQ8IW19 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APLFQ8IW19 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
APLFQ8IW19 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.13■□□□□ 0.65
APLFQ8IW19 MIR4497-201ENST00000583208 89 ntBASIC19.13■□□□□ 0.65
APLFQ8IW19 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.13■□□□□ 0.65
APLFQ8IW19 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.13■□□□□ 0.65
APLFQ8IW19 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.13■□□□□ 0.65
APLFQ8IW19 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
APLFQ8IW19 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APLFQ8IW19 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.13■□□□□ 0.65
APLFQ8IW19 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms