Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 C2orf69P4-201ENST00000565394 541 ntBASIC18.15■□□□□ 0.5
CCDC71Q8IV32 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 Z99916.2-201ENST00000604037 246 ntBASIC18.15■□□□□ 0.5
CCDC71Q8IV32 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 AC009237.14-201ENST00000609975 1594 ntBASIC18.15■□□□□ 0.5
CCDC71Q8IV32 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CCDC71Q8IV32 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CCDC71Q8IV32 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC71Q8IV32 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 POM121L13P-201ENST00000422362 380 ntBASIC18.14■□□□□ 0.49
CCDC71Q8IV32 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 AC007613.1-201ENST00000572811 2597 ntBASIC18.14■□□□□ 0.49
CCDC71Q8IV32 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 AL138781.2-201ENST00000617896 1843 ntBASIC18.14■□□□□ 0.49
CCDC71Q8IV32 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC71Q8IV32 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 LETM1P2-201ENST00000597330 2178 ntBASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 LINC01465-201ENST00000408887 1940 ntBASIC18.13■□□□□ 0.49
CCDC71Q8IV32 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC71Q8IV32 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 AC005082.1-201ENST00000413042 2259 ntBASIC18.12■□□□□ 0.49
CCDC71Q8IV32 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC71Q8IV32 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms