Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPAS4Q8IUM7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 AC073314.1-201ENST00000568729 2216 ntBASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.81■□□□□ 0.92
NPAS4Q8IUM7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 AL691432.2-201ENST00000607222 2038 ntBASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPAS4Q8IUM7 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 KRT18P38-201ENST00000449496 1282 ntBASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
NPAS4Q8IUM7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 AL512408.1-201ENST00000569378 2000 ntBASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 AC005332.1-201ENST00000577698 1310 ntBASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPAS4Q8IUM7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 NEK4P2-201ENST00000580004 1012 ntBASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms