Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 AC018445.3-201ENST00000624177 1945 ntBASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 MIR663A-201ENST00000385250 93 ntBASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 GPX1P1-201ENST00000388829 606 ntBASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CDCA4P2-201ENST00000441182 718 ntBASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 AC092437.1-201ENST00000624794 1048 ntBASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.46□□□□□ -0.41
MRPL55Q7Z7F7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 AC087289.5-201ENST00000586076 3175 ntBASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
MRPL55Q7Z7F7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 AC006970.2-201ENST00000450065 779 ntBASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 IKBKGP1-201ENST00000612193 1073 ntBASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.45□□□□□ -0.42
MRPL55Q7Z7F7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms