Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SCXQ7RTU7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SCXQ7RTU7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 KRASP1-201ENST00000407852 552 ntBASIC12.79□□□□□ -0.36
SCXQ7RTU7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.79□□□□□ -0.36
SCXQ7RTU7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SCXQ7RTU7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 AC012618.2-201ENST00000428058 849 ntBASIC12.78□□□□□ -0.36
SCXQ7RTU7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.78□□□□□ -0.36
SCXQ7RTU7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SCXQ7RTU7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.77□□□□□ -0.36
SCXQ7RTU7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SCXQ7RTU7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCXQ7RTU7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCXQ7RTU7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCXQ7RTU7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SCXQ7RTU7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.77□□□□□ -0.37
SCXQ7RTU7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCXQ7RTU7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SCXQ7RTU7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SCXQ7RTU7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms